Active Contour Models and Deep Learning

A Fast Global Minimization Algorithm for Active Contour Models
based on the Split-Bregman Method, Matlab/C Code, April 10, 2009
http://www.math.ucla.edu/~xbresson/code.html#Active

3D Active Shape Models Using GradientDescent Optimization of Description Length ?

Deep Learning Shape Priors for Object Segmentation

http://www.cv-foundation.org/openaccess/content_cvpr_2013/papers/Chen_Deep_Learning_Shape_2013_CVPR_paper.pdf

Deep Learning for Medical Image Analysis
Combined Deep-Learning and Deformable-Model
Approach to Fully Automatic Segmentation of the Left
Ventricle in Cardiac MRI

Deep Convolutional Network Cascade for Facial Point Detection

Matlab/Octave toolbox for deep learning. Includes Deep Belief Nets, Stacked Autoencoders, Convolutional Neural Nets, Convolutional Autoencoders and vanilla Neural Nets. Each method has examples to get you started.
https://github.com/rasmusbergpalm/DeepLearnToolbox


Combining deep learning and level set for the automated segmentation of the left ventricle of the heart from cardiac cine magnetic resonance